2020

• 期刊   Tran HB, Risky PN, McDaniel Padgett SR, Lee YH, 莊秀琪, 鄭達智*, Molecular characterization of cobia (Rachycentron canadum) CD4 homologues revealed the first evidence of soluble CD4 in fish., Fish Shellfish Immunol., 9, 239-242

2019

• 期刊   Tran HB, Chen SC, 莊秀琪, 鄭達智*, Molecular cloning of IL-6, IL-10, IL-11, IFN-ɤ and modulation of pro- and anti-inflammatory cytokines in cobia (Rachycentron canadum) after Photobacterium damselae subsp. piscicida infection., Comp Biochem Physiol B Biochem Mol Biol., 230, 10-18
• 期刊   Tongkamsai S, Lee MS, 鄭明珠, 莊秀琪, 蔡宜倫, 連一洋*, Persistent Infection with Chicken Anemia Virus in 3-Week-Old Chickens Induced by Inoculation of the Virus by the Natural Route. Pathogens., Pathogens, 8, 2, 48-56

2015

• 獲獎   國家新創獎, 國家生技醫療產業策進會, 中華民國

2013

• 期刊   Chen CC, Ho CY, 莊秀琪, Tain YL, Hsieh CS, Kuo FY, Yang CY, Huang LT*, Fish omega-3 fatty acids induce liver fibrosis in the treatment of bile duct-ligated rats., Digestive Diseases and Sciences, 58(2):440-7, 2, 440-447
• 期刊   莊秀琪*, 張清棟, Pi-Hang Chen, Chia-Jung Chang, 劉世華, 陳志誠, Docosahexaenoic acid and phosphatidylserine improves the antioxidant activities in vitro and in vivo and cognitive functions of the developing brain., Food Chem, 138, 1, 342-347

2012

• 獲獎   國家發明獎, 經濟部, 中華民國
• 期刊   洪麗香, 連一洋, Ching-Ho Wang, Shiang-Lin Li, Hsin-Pei Li, Hui-Jiun Shiu, 莊秀琪*, The adjuvant efficacies of the plasmid containing multiple copies of avian-specific CpG motif coadministrated with poultry vaccines in chickens., Taiwan Vet J, 38(1):19-29, 1, 19-29
• 期刊   劉世華, 張清棟, Pi-Hang Chen, Jheng-Ren Su, 陳志誠, 莊秀琪*, Docosahexaenoic acid and phosphatidylserine supplementations improve antioxidant activities and cognitive functions of the developing brain on pentylenetetrazol-induced seizure model., Brain Research, 1451, 19-26
• 期刊   莊秀琪*, 鄭力廷, Li-Hsiang Hung, Pei-Chun Tsai, Ioanna Skountzou, Baozhong Wang, Richard W Compans, 連一洋, Salmonella flagellin enhances mucosal immunity of avian influenza vaccine in chickens., Vet Microbiol, 157, 1-2, 69-77

2011

• 期刊   洪麗香, 蔡佩君, 王金和, 李尚玲, 黃金誠, 連一洋, 莊秀琪*, Immunoadjuvant efficacy of plasmids with multiple copies of a CpG motif coadministrated with avian influenza vaccine in chickens., Vaccine 2011 Jun 24;29(29-30):4668-75., 29, 29-30, 4668-4675
• 期刊   洪麗香, 連一洋, 王金和, 李尚玲, 莊秀琪*, CpG DNA adjuvant in avian vaccines., 台灣獸醫誌, 37, 4, 284-297
• 期刊   Jen-Hsiung Tsai, 黃國林, 邱春惠, 林志忠, 郭文健, 林文印, 莊秀琪, 楊琮惠, 陳瑞仁*, Particle-bound PAHs and Particle-extract-induced Cytotoxicity of Emission from a Diesel-generator Fuelled with Soy-biodiesel., Aerosol and Air Quality Research, 2011;11: 822–836., 11, 7, 822-836

2010

• 期刊   吳美莉, 黃卓治, Hung HJ, 余柔慧, 鍾文彬, 莊秀琪*, Investigation of beta-glucans binding to human/mouse dectin-1 and associated immunomodulatory effects on two monocyte/macrophage cell lines., Biotechnol Prog, 26, 5, 1391-1399

2009

• 獲獎   臺灣省畜牧獸醫學會九十八年度學術獎, 臺灣省畜牧獸醫學會, 中華民國
• 期刊   莊秀琪*, 連毅, 鍾文彬, Leukotriene C4 release and gene expressions of IL-8 and MCP-1 in porcine alveolar epithelial type II cells., Res Vet Sci , 86, 78-87

2008

• 研討會   洪麗香, 連一洋, 莊秀琪*, Immunoadjuvant Efficacy of CpG oligodeoxynucleotides Coadministrated with Newcastle Disease Vaccine in Chickens, 台灣畜牧獸醫學會97年度春季學術研討會, 國立屏東科技大學, 中華民國, 20-20
• 期刊   吳家彰, 莊秀琪, 彭郁棠, 張清華, 鍾文彬*, 豬樹狀突細胞受豬假性狂犬病病毒感染後其表現型及功能的改變, 台灣獸醫誌, 34, 3, 177-183
• 期刊   劉學陶, 莊秀琪*, 張秀鑾, Tsai CP, Lin EC, Yang PC, 鍾文彬, Decay of Maternally Derived Antibodies and Seroconversion to Respiratory Viral Infection in Pig Herds., 台灣獸醫誌, 中華民國獸醫學會, 34, 127-141
• 期刊   Lin CC, 陳瑞仁, 黃國林, Lee WJ, Lin WY, Tsai JH, 莊秀琪*, PAHs, PAH-induced carcinogenic potency, and particle-extract-induced cytotoxicity of traffic-related nano/ultrafine particles., Environmental Science & Technology, 42, 11, 4229-4235
• 期刊   Chang HC, Peng YT, Chang HL, 莊秀琪*, 鍾文彬, Phenotypic and functional modulation of bone marrow-derived dendritic cells by porcine reproductive and respiratory syndrome virus., Veterinary Microbiology, 129(3-4):281-293, 3-4, 281-293
• 期刊   莊秀琪*, Ho CT, 黃卓治, Anti-hypersensitive and anti-inflammatory activities of water extract of Zingiber zerumbet (L.) Smith., Food Agr Immun, 19, 2, 117-129
• 期刊   莊秀琪*, 夏良宙, 劉世華, The effects of vitamin A supplementation on the production of hypersensitive inflammatory mediators of ammonia-induced airway in pigs., Food Agr Immun, 19, 4, 283-291

2007

• 研討會   陳必恆, 張清棟, 陳至誠, 莊秀琪*, 以PTZ誘發大鼠癲癇模式中探討DHA對於中樞神經系統氧化壓力的影響, 中華民國獸醫學會台灣畜牧獸醫學會96年度聯合年會暨學術論文發表會, 中興大學, 中華民國, 84-84
• 研討會   林淑雯, 余柔慧, 黃卓治, 吳美莉, 鍾文彬, 莊秀琪*, 以哺乳動物細胞系統表現Dectin-1基因之醣類辨識區域, 台灣畜牧獸醫學會96年度春季學術研討會, 台灣大學, 中華民國, 59-59
• 研討會   余柔慧, 林淑雯, 黃卓治, 鍾文彬, 吳美莉, 莊秀琪*, 建立評估beta-葡聚糖細胞促進活性之細胞平台, 台灣畜牧獸醫學會96年度春季學術研討會, 台灣大學, 中華民國, 60-60
• 期刊   Lin CC, 陳瑞仁*, 黃國林, Lee WJ, Lin WY, Liao CJ, 莊秀琪, Chiu CH, Water-soluble ions in nano/ultrafine/fine/coarse particles collected near a busy road and at a rural site., Environ Pollut., 145, 2, 562-570
• 期刊   陳石柱*, Chen YC, Kwang J, Manopo I, Wang PC, 莊秀琪, Liaw LL, Chiu SH, Metschnikowia bicuspidata dominates in Taiwanese cold-weather yeast infections of Macrobrachium rosenbergii., Dis Aquat Organ., 75, 3, 191-199

2006

• 研討會   莊秀琪*, Fang MS, 鍾文彬, Lee JW, 張秀鑾, Immunostimulatory effects of CpG motifs on porcine dendritic cells., Proceedings of 12th AAAP Congress, Busan, 中華民國, 160-160
• 期刊   陳志誠, 莊秀琪, 鍾美勇, 黃立同*, Menhaden fish oil improves spatial memory in rat pups following recurrent pentylenetetrazole-induced seizures., Epilepsy Behav. , 8, 3, 516-521
• 期刊   蘇正任, 陳志誠, 吳美莉, 陳柏榮, 莊秀琪*, 二十二碳六烯酸對Pentylenetetrazol (PTZ) 誘發大鼠癲癇造成神經膠細胞凋亡作用及空間記憶之影響。, 台灣農業化學與食品科學, 44, 4, 272-281
• 期刊   Da-Chung Chen, Yueh-Fang Chung, Yao-Tsug Yeh, 莊秀琪, Fu-Chen Kuo, Ou-Yang Fu, Hue-Yong Chen, Ming-Feng Hou, Shyng-Shou F. Yuan*, Serum adiponectin and leptin levels in Taiwanese breast cancer patients., Cancer Lett, 237, 1, 109-114
• 期刊   莊秀琪*, 楊琮惠, 陳瑞仁, 以豬肺泡巨噬細胞平台評估大氣奈米級懸浮微粒之細胞毒性, 西北農林科技大學學報, 34, 87-92
• 期刊   莊秀琪*, CpG oligodeoxynucleotides as DNA adjuvants in vertebrates and their applications in immunotherapy., Int. Immunopharmacol., 6, 1586-1596

2005

• 獲獎   2005年全國技專校院學生實務專題製作, 教育部, 中華民國
• 期刊   鍾文彬*, Wen-Hung Chan, 莊秀琪, 連毅, 吳家彰, Yu-Liang Huang, Real-time PCR for quantification of porcine reproductive and respiratory syndrome virus and porcine circovirus type 2 in naturally-infected and challenged pigs., J Virol Methods, 124, 11-19
• 期刊   莊秀琪*, 陳昱彰, 鍾文彬, 吳彰哲, 探討豬隻骨髓造血母細胞試管內分化為樹狀突細胞之細胞特徵。, 台灣獸醫誌, 中華民國獸醫學會, 31, 3, 195-207

2004

• 研討會   莊秀琪*, YZ Chen, 鍾文彬, CJ Wu, Morphology and phenotypic characterization of porcine dendritic cells derived from bone marrow haematopoietic cells, International Biotech Conference & Exhibition, Kaohsiung, 中華民國, 161-161
• 研討會   莊秀琪*, TH Yang, 陳瑞仁, An in vitro screening system on biological toxicity of air-borne particles by alveolar macrophage and its application on selecting the active components extracted from herb, International Biotech Conference & Exhibition, Kaohsiung, 中華民國, 147-147
• 研討會   莊秀琪*, TC Yeh, 陳瑞仁, Interactions of ammonia exposure and obesity on pulmonary inflammation in diet-induced obesity mice with or without vitamin A supplementation, International Biotech Conference & Exhibition, Kaohsiung, 中華民國, 120-120
• 研討會   莊秀琪*, MS Fang, 鍾文彬, CJ Wu, Construction on multi-copies of CpG ODN and evaluation on its adjuvant’s efficacy., International Biotech Conference & Exhibition, Kaohsiung, 中華民國, 159-159
• 研討會   莊秀琪*, Jheng-Ren Su, BZ Chen, JC Chen, Effect of docosahexaenoic qcid on qpoptosis of glial cells and gene expression of neurexin in rats with pentylenetetrazole-induced epileptic seizure, International Biotech Conference & Exhibition, 高雄, 中華民國, 157-157
• 專書   莊秀琪*, 生物科技與農業生產, 國家圖書館出版, 1, ISBN: 957017482X

2003

• 期刊   Metschnikowia bicuspidata and Enterococcus faecium con-infection in the giant freshwater prawn, Macrobrachium rosenbergii., Dis Aqua Org 55:161-167.

2002

• 期刊   Lactococcus garvieae, a bacterial infection in grey mullet, Mugil cephalus., in Taiwan, J Fish Dis 25：727-732
• 期刊   Distribution and Quantitation of Porcine Reproductive and Respiratory Syndrome Virus in Natually Infected Pigs., Taiwan Vet J 28:125-133.

2001

• 期刊   Effects of Various Levels of Zinc and Copper in the Diet on the Growth and Immune Responses of Weanling Pigs., J Agri Assoc China 2:82-92.
• 期刊   Ascending cholangitis provokes IL-8 and MCP-1 Expression and promotes inflammatory cell infiltration in the cholestatic rat liver., J Pediatr Surg 36:1623-1628.

2000

• 期刊   Isolation and Purification of Alveolar Type II Cells from Rat, Guinea Pig, and Pig., J Chin Soc Vet Sci 26:124-132.
• 期刊   Eicosanoid Production and Cytokine mRNA Levels in Piglets Fed with Various Edible Oils., J Chin Soc Vet Sci 26:1-8.

1997

• 期刊   Dietary Fats Affect the Gene Expression of Hormone-Sensitive Lipase in Porcine Adipose Tissue., J. Agri Assoc China 180:57-67.
• 期刊   Dietary Fats Affect the Gene Expression of Hormone-Sensitive Lipase in Porcine Adipose Tissue., J. Agri Assoc China 180:57-67.